Variant report

Variant	rs141925171
Chromosome Location	chr7:120152077-120152078
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516686	chr7:120015843-120223084	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1026821	chr7:120020317-120190437	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv889116	chr7:120098304-120180671	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv889117	chr7:120122040-120266458	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1801753	chr7:120151418-120157622	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120143600-120159400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr7:120151400-120152200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr7:120151400-120152800	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr7:120151800-120152200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr7:120151800-120152800	Enhancers	Brain Germinal Matrix	brain
6	chr7:120152000-120152200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr7:120152000-120152200	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr7:120152000-120152600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr7:120152000-120152800	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr7:120152000-120152800	Enhancers	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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