Variant report

Variant	rs142086726
Chromosome Location	chr6:121808940-121808941
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5458	chr6:121787521-121823054	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3473262	chr6:121808803-121809266	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
3	esv3473259	chr6:121808859-121809238	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
4	esv3473260	chr6:121808866-121809253	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv3473261	chr6:121808878-121809205	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3473264	chr6:121808933-121809165	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121806600-121809600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr6:121807000-121809600	Weak transcription	NHEK	skin
3	chr6:121807000-121812600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr6:121807200-121809200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr6:121807400-121809000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr6:121807400-121812600	Weak transcription	Hela-S3	cervix
7	chr6:121807400-121824400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr6:121808200-121810000	Enhancers	A549	lung
9	chr6:121808400-121809000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:121808400-121809000	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr6:121808400-121810000	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr6:121808400-121810000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr6:121808400-121810400	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr6:121808400-121810400	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr6:121808600-121809200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr6:121808600-121809800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr6:121808600-121809800	Enhancers	HMEC	breast
18	chr6:121808600-121810400	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr6:121808800-121809000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr6:121808800-121809200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr6:121808800-121809200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr6:121808800-121809800	Weak transcription	H9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links