Variant report

Variant	rs142137287
Chromosome Location	chr6:114445003-114445004
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024062	chr6:114311029-114679557	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
2	esv3329957	chr6:114444993-114445434	Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	n/a
3	esv2609277	chr6:114445003-114445003	Genic enhancers Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
4	esv2107895	chr6:114445003-114445004	Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114430800-114477800	Weak transcription	Brain Anterior Caudate	brain
2	chr6:114438000-114445200	Weak transcription	Psoas Muscle	Psoas
3	chr6:114439400-114446800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr6:114443600-114445200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:114444000-114445200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:114444000-114445200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr6:114444000-114445200	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr6:114444000-114445200	Weak transcription	HSMM	muscle
9	chr6:114444000-114446800	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr6:114444000-114446800	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr6:114444000-114446800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr6:114444000-114449600	Weak transcription	HepG2	liver
13	chr6:114444000-114465200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr6:114444000-114466000	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr6:114444200-114446800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr6:114445000-114445200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr6:114445000-114445600	Genic enhancers	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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