Variant report

Variant	rs142183071
Chromosome Location	chrX:31216236-31216237
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530449	chrX:30962926-31375215	Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv869389	chrX:31207964-31963300	Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv481896	chrX:31212683-31546984	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3407256	chrX:31214281-31548379	Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:31140200-31227600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chrX:31142000-31236600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chrX:31156800-31224800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chrX:31182000-31227000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chrX:31186800-31217600	Weak transcription	Fetal Intestine Small	intestine
6	chrX:31196600-31227600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chrX:31197200-31217400	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chrX:31197800-31219400	Weak transcription	Adipose Nuclei	Adipose
9	chrX:31198400-31217200	Weak transcription	HepG2	liver
10	chrX:31201000-31218600	Weak transcription	Left Ventricle	heart
11	chrX:31204400-31231600	Weak transcription	Colon Smooth Muscle	Colon
12	chrX:31205600-31231200	Weak transcription	HSMMtube	muscle
13	chrX:31206800-31219600	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chrX:31206800-31227000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chrX:31208800-31226800	Weak transcription	NH-A	brain
16	chrX:31209000-31217200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chrX:31209800-31217400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chrX:31209800-31219200	Weak transcription	Ovary	ovary
19	chrX:31211400-31217800	Weak transcription	Fetal Heart	heart
20	chrX:31212000-31217800	Weak transcription	HUES64 Cell Line	embryonic stem cell
21	chrX:31212600-31231600	Weak transcription	Stomach Smooth Muscle	stomach
22	chrX:31213800-31221000	Weak transcription	Gastric	stomach
23	chrX:31214200-31240600	Weak transcription	Brain Angular Gyrus	brain
24	chrX:31214800-31216600	Genic enhancers	Hela-S3	cervix
25	chrX:31214800-31217400	Weak transcription	HUES6 Cell Line	embryonic stem cell
26	chrX:31215200-31217200	Strong transcription	Liver	Liver
27	chrX:31215200-31250400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chrX:31215400-31219200	Weak transcription	Pancreas	Pancrea
29	chrX:31215600-31231400	Weak transcription	Fetal Muscle Leg	muscle
30	chrX:31215800-31222200	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chrX:31215800-31222800	Weak transcription	Brain Anterior Caudate	brain
32	chrX:31216000-31217800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
33	chrX:31216000-31227200	Weak transcription	HMEC	breast
34	chrX:31216000-31248200	Weak transcription	Psoas Muscle	Psoas
35	chrX:31216200-31216600	Strong transcription	Duodenum Smooth Muscle	Duodenum

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