Variant report

Variant rs142300575
Chromosome Location chr1:145024258-145024259
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145015400-145030000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:145016800-145032600 Weak transcription Liver Liver
3 chr1:145016800-145032800 Weak transcription Spleen Spleen
4 chr1:145020600-145028000 Enhancers Brain Hippocampus Middle brain
5 chr1:145021000-145027800 Enhancers Brain Angular Gyrus brain
6 chr1:145021200-145024400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr1:145021200-145024600 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:145021200-145026000 Enhancers Brain Inferior Temporal Lobe brain
9 chr1:145021200-145026800 Enhancers Psoas Muscle Psoas
10 chr1:145021400-145024600 Enhancers Left Ventricle heart
11 chr1:145021600-145024400 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr1:145021800-145024600 Genic enhancers Aorta Aorta
13 chr1:145022000-145024600 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr1:145022000-145024600 Enhancers H1 Cell Line embryonic stem cell
15 chr1:145022000-145024600 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:145022000-145024600 Enhancers HUES64 Cell Line embryonic stem cell
17 chr1:145022000-145024600 Enhancers Right Ventricle heart
18 chr1:145022000-145025600 Enhancers Fetal Brain Female brain
19 chr1:145022200-145024400 Enhancers HUES6 Cell Line embryonic stem cell
20 chr1:145022200-145024400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:145022200-145024600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:145022400-145024400 Enhancers Cortex derived primary cultured neurospheres brain
23 chr1:145022400-145024600 Enhancers Right Atrium heart
24 chr1:145022600-145024400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:145022600-145025800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:145022800-145026000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:145023000-145024600 Enhancers Fetal Muscle Leg muscle
28 chr1:145023000-145024800 Enhancers Fetal Brain Male brain
29 chr1:145023000-145026000 Genic enhancers HSMM muscle
30 chr1:145023200-145024400 Genic enhancers Muscle Satellite Cultured Cells --
31 chr1:145023200-145024600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
32 chr1:145023200-145024800 Enhancers Fetal Heart heart
33 chr1:145023200-145025800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:145023200-145025800 Enhancers HMEC breast
35 chr1:145023200-145026000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:145023200-145026400 Enhancers Pancreatic Islets Pancreatic Islet
37 chr1:145023400-145024400 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr1:145023400-145024400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:145023400-145025400 Enhancers Adipose Nuclei Adipose
40 chr1:145023400-145028000 Weak transcription Rectal Smooth Muscle rectum
41 chr1:145023600-145024400 Flanking Active TSS K562 blood
42 chr1:145023600-145025200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:145023600-145025400 Genic enhancers NHDF-Ad bronchial
44 chr1:145023600-145025800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:145023600-145025800 Enhancers NHEK skin
46 chr1:145023600-145026000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:145023600-145027200 Enhancers Brain Germinal Matrix brain
48 chr1:145023600-145027600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr1:145023600-145027800 Enhancers Brain Substantia Nigra brain
50 chr1:145023800-145024400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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