The 2.0 version of rSNPBase

Variant report

Variant rs142417278
Chromosome Location chr22:33116347-33116348
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33104400-33117000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr22:33110400-33116800 Weak transcription NHDF-Ad bronchial
3 chr22:33111000-33118600 Weak transcription HSMMtube muscle
4 chr22:33111400-33116800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr22:33112200-33121400 Enhancers Fetal Thymus thymus
6 chr22:33113000-33121600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr22:33113400-33120400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr22:33113800-33116800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr22:33113800-33116800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr22:33114000-33116400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr22:33114000-33116800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr22:33114200-33116400 Weak transcription Spleen Spleen
13 chr22:33114200-33116600 Weak transcription NH-A brain
14 chr22:33114200-33116600 Weak transcription Osteobl bone
15 chr22:33114200-33119400 Weak transcription Esophagus oesophagus
16 chr22:33114400-33116400 Weak transcription Lung lung
17 chr22:33114400-33116400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr22:33114400-33116600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr22:33114400-33116800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr22:33114400-33116800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr22:33114400-33116800 Weak transcription Adipose Nuclei Adipose
22 chr22:33114400-33116800 Weak transcription Fetal Lung lung
23 chr22:33114400-33116800 Weak transcription Right Atrium heart
24 chr22:33114400-33116800 Weak transcription NHLF lung
25 chr22:33114400-33117000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr22:33114400-33119000 Weak transcription Small Intestine intestine
27 chr22:33114400-33119400 Weak transcription Left Ventricle heart
28 chr22:33114400-33121400 Weak transcription Colon Smooth Muscle Colon
29 chr22:33114600-33116600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr22:33114600-33116600 Weak transcription Fetal Stomach stomach
31 chr22:33114600-33116600 Weak transcription NHEK skin
32 chr22:33114600-33121800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr22:33115000-33116600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr22:33115000-33116800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr22:33115000-33116800 Weak transcription Placenta Placenta
36 chr22:33115200-33117400 Enhancers Fetal Muscle Leg muscle
37 chr22:33115600-33116800 Enhancers HepG2 liver
38 chr22:33115600-33119600 Enhancers Thymus Thymus
39 chr22:33115800-33117400 Enhancers Fetal Intestine Large intestine
40 chr22:33115800-33119400 Enhancers Dnd41 blood
41 chr22:33115800-33122200 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr22:33116000-33117600 Enhancers Fetal Intestine Small intestine
43 chr22:33116000-33119400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr22:33116000-33119600 Enhancers Primary T cells from cord blood blood
45 chr22:33116200-33117000 Enhancers Fetal Kidney kidney
46 chr22:33116200-33117400 Enhancers Primary hematopoietic stem cells blood
47 chr22:33116200-33117400 Enhancers Fetal Muscle Trunk muscle
48 chr22:33116200-33119400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015