Variant report

Variant rs1424956
Chromosome Location chr2:53462395-53462396
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53456600-53464000 Enhancers Primary T helper 17 cells PMA-I stimulated --
2 chr2:53459600-53464200 Enhancers Dnd41 blood
3 chr2:53459800-53462600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr2:53460200-53463000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr2:53460800-53462800 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr2:53461000-53462800 Enhancers HUES48 Cell Line embryonic stem cell
7 chr2:53461000-53463000 Enhancers HUES64 Cell Line embryonic stem cell
8 chr2:53461200-53463000 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr2:53461200-53463200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:53461400-53463000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:53461400-53463000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr2:53461400-53463000 Enhancers HUES6 Cell Line embryonic stem cell
13 chr2:53461400-53464000 Enhancers Primary hematopoietic stem cells blood
14 chr2:53461400-53464200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:53461600-53462600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:53461600-53463600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:53461600-53463800 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr2:53461800-53463200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:53462000-53462400 Weak transcription H9 Cell Line embryonic stem cell
20 chr2:53462000-53463000 Weak transcription Fetal Thymus thymus
21 chr2:53462000-53463600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr2:53462000-53464200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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