Variant report

Variant rs142777426
Chromosome Location chr5:43034596-43034597
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43020200-43034800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:43020800-43037400 Weak transcription HSMM muscle
3 chr5:43020800-43038400 Weak transcription Spleen Spleen
4 chr5:43021200-43038600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr5:43021600-43034600 Weak transcription Hela-S3 cervix
6 chr5:43021800-43034600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr5:43022000-43036400 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr5:43029400-43034600 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr5:43029400-43037600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr5:43029800-43034600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr5:43029800-43034600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr5:43030000-43034800 Weak transcription GM12878-XiMat blood
13 chr5:43030600-43034800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr5:43031200-43034800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr5:43031400-43034600 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr5:43033600-43035400 Flanking Active TSS HUVEC blood vessel
17 chr5:43033800-43034600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
18 chr5:43033800-43034600 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
19 chr5:43033800-43034600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr5:43033800-43034600 Bivalent Enhancer Placenta Amnion Placenta Amnion
21 chr5:43033800-43034600 Active TSS NHLF lung
22 chr5:43033800-43035200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr5:43033800-43035200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:43033800-43035400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
25 chr5:43033800-43035400 Flanking Active TSS NH-A brain
26 chr5:43034000-43034600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
27 chr5:43034000-43034600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
28 chr5:43034000-43034600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr5:43034000-43034600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:43034000-43034600 Bivalent/Poised TSS Colonic Mucosa Colon
31 chr5:43034000-43034600 Bivalent Enhancer Fetal Lung lung
32 chr5:43034000-43034600 Enhancers Pancreas Pancrea
33 chr5:43034000-43034600 Active TSS Skeletal Muscle Female skeletal muscle
34 chr5:43034000-43034600 Bivalent/Poised TSS Stomach Smooth Muscle stomach
35 chr5:43034000-43034800 Active TSS Adipose Nuclei Adipose
36 chr5:43034000-43034800 Active TSS Psoas Muscle Psoas
37 chr5:43034000-43034800 Active TSS Right Atrium heart
38 chr5:43034000-43035000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
39 chr5:43034000-43035000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
40 chr5:43034000-43035000 Bivalent Enhancer Fetal Muscle Trunk muscle
41 chr5:43034000-43035000 Bivalent/Poised TSS Left Ventricle heart
42 chr5:43034000-43037000 Enhancers Primary T helper cells PMA-I stimulated --
43 chr5:43034200-43034600 Flanking Bivalent TSS/Enh iPS DF 6.9 Cell Line embryonic stem cell
44 chr5:43034200-43034600 Bivalent/Poised TSS Brain Anterior Caudate brain
45 chr5:43034200-43034600 Enhancers Esophagus oesophagus
46 chr5:43034200-43034600 Bivalent Enhancer Fetal Heart heart
47 chr5:43034200-43034600 Flanking Active TSS Placenta Placenta
48 chr5:43034200-43034600 Active TSS Skeletal Muscle Male skeletal muscle
49 chr5:43034200-43034800 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
50 chr5:43034200-43034800 Enhancers Primary T helper naive cells fromperipheralblood blood

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