Variant report

Variant	rs142801942
Chromosome Location	chr3:46639394-46639395
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013306	chr3:46469014-46698538	Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv876738	chr3:46639048-46680063	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:46628800-46651000	Weak transcription	Right Atrium	heart
2	chr3:46634800-46650800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr3:46635000-46640200	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr3:46635000-46641400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr3:46635600-46640200	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr3:46636000-46639600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr3:46637400-46640200	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr3:46637600-46640200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr3:46637800-46640200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr3:46637800-46640400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr3:46637800-46640400	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr3:46638600-46644800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr3:46639000-46640400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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