Variant report

Variant	rs142826205
Chromosome Location	chr10:98903772-98903773
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532232	chr10:98360775-99141797	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	esv2758236	chr10:98789963-98962472	Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2759777	chr10:98789963-98962472	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv7506	chr10:98902440-98940209	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98880200-98912800	Weak transcription	Thymus	Thymus
2	chr10:98892400-98911400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr10:98901000-98907400	Strong transcription	Fetal Thymus	thymus
4	chr10:98901000-98923200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr10:98901200-98909000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr10:98901200-98910400	Weak transcription	Brain Germinal Matrix	brain
7	chr10:98901400-98904000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr10:98901400-98908600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr10:98901400-98909800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:98901400-98911200	Weak transcription	Fetal Brain Female	brain
11	chr10:98901400-98918400	Weak transcription	Brain Angular Gyrus	brain
12	chr10:98901600-98906400	Enhancers	Fetal Lung	lung
13	chr10:98902000-98904000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr10:98902200-98909800	Weak transcription	HepG2	liver
15	chr10:98902400-98904600	Enhancers	Fetal Brain Male	brain
16	chr10:98903600-98905000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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