Variant report

Variant	rs142853696
Chromosome Location	chr8:118971436-118971437
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933516	chr8:118764605-119009093	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1030459	chr8:118840179-119155835	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv831440	chr8:118871930-119052269	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1032355	chr8:118896733-119003223	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv612047	chr8:118939094-119468609	Flanking Active TSS Enhancers Genic enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
6	nsv1015380	chr8:118948652-119418389	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
7	nsv539736	chr8:118948652-119418389	Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
8	nsv1025002	chr8:118970940-119069418	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118966800-118971800	Weak transcription	Right Ventricle	heart
2	chr8:118967000-118972200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:118967200-118971800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr8:118967400-118971800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr8:118967600-118971600	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr8:118968200-118971600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr8:118968800-118972800	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr8:118969000-118971600	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr8:118969000-118971800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr8:118969000-118972200	Enhancers	H1 Cell Line	embryonic stem cell
11	chr8:118969000-118974600	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr8:118969200-118972200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr8:118969200-118972800	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr8:118969800-118986800	Weak transcription	Lung	lung
15	chr8:118970000-118971800	Enhancers	Fetal Intestine Small	intestine
16	chr8:118970000-118971800	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr8:118970000-118972200	Enhancers	NHLF	lung
18	chr8:118970000-118973000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr8:118970000-118973000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr8:118970000-118973200	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr8:118970000-118975200	Weak transcription	Right Atrium	heart
22	chr8:118970200-118971600	Enhancers	HepG2	liver
23	chr8:118970200-118971600	Enhancers	Osteobl	bone
24	chr8:118970200-118972200	Enhancers	NHEK	skin
25	chr8:118970200-118973000	Weak transcription	HMEC	breast
26	chr8:118970200-118981800	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr8:118970400-118972200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr8:118970400-118972200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr8:118970400-118972600	Weak transcription	A549	lung
30	chr8:118970400-118989800	Weak transcription	HSMMtube	muscle
31	chr8:118970600-118972000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr8:118970600-118972200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr8:118970600-118972600	Weak transcription	Liver	Liver
34	chr8:118970600-118972800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr8:118970600-118973000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr8:118970600-118973000	Weak transcription	Adipose Nuclei	Adipose
37	chr8:118970600-118973400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr8:118970600-118977600	Weak transcription	Duodenum Mucosa	Duodenum
39	chr8:118970600-118981800	Weak transcription	Fetal Lung	lung
40	chr8:118970800-118972200	Enhancers	HSMM	muscle
41	chr8:118970800-118976000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr8:118970800-118989000	Weak transcription	HUVEC	blood vessel
43	chr8:118971000-118972000	Enhancers	Fetal Intestine Large	intestine
44	chr8:118971200-118971600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr8:118971200-118971600	Enhancers	Esophagus	oesophagus
46	chr8:118971200-118971600	Enhancers	Psoas Muscle	Psoas
47	chr8:118971200-118971600	Enhancers	Small Intestine	intestine
48	chr8:118971200-118971800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
49	chr8:118971200-118971800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr8:118971200-118971800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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