Variant report

Variant	rs142868889
Chromosome Location	chr12:117641280-117641281
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832526	chr12:117530234-117723821	Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv510592	chr12:117618872-117684713	Bivalent/Poised TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
3	nsv560346	chr12:117623651-117642113	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	n/a
4	nsv560347	chr12:117623651-117643067	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	n/a
5	esv1844687	chr12:117630765-117643067	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	esv1844732	chr12:117630765-117643067	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
7	nsv560348	chr12:117630765-117643067	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
8	esv3498541	chr12:117639969-117644967	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3500134	chr12:117640219-117644417	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3500135	chr12:117640219-117644417	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
11	nsv560349	chr12:117640545-117642900	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
12	nsv560350	chr12:117640545-117643007	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv1845178	chr12:117640545-117643067	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	nsv560351	chr12:117640545-117643067	Weak transcription Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3498552	chr12:117640879-117643722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3498563	chr12:117640879-117643722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
17	nsv826524	chr12:117640899-117642852	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
18	nsv52574	chr12:117640973-117643553	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv21122	chr12:117641095-117643946	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
20	nsv560352	chr12:117641229-117642222	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	nsv560353	chr12:117641229-117642274	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	nsv560354	chr12:117641229-117642624	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
23	nsv560355	chr12:117641229-117642738	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
24	nsv560356	chr12:117641229-117642792	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
25	nsv560357	chr12:117641229-117642900	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
26	nsv560358	chr12:117641229-117643007	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
27	esv1843185	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
28	esv1843698	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
29	esv1846062	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
30	esv1847915	chr12:117641229-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
31	esv1848672	chr12:117641229-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
32	esv1850885	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
33	nsv560359	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
34	nsv560360	chr12:117641229-117650873	Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
35	esv1845703	chr12:117641259-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
36	esv1845740	chr12:117641259-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117633600-117645000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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