Variant report

Variant	rs1428765
Chromosome Location	chr16:64935223-64935224
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs11859134	1.00[ASN][1000 genomes]
rs11861754	1.00[ASN][1000 genomes]
rs11862966	1.00[ASN][1000 genomes]
rs11866768	1.00[ASN][1000 genomes]
rs11866805	1.00[ASN][1000 genomes]
rs11866836	1.00[ASN][1000 genomes]
rs12934795	1.00[ASN][1000 genomes]
rs13338701	1.00[ASN][1000 genomes]
rs1366514	1.00[ASN][1000 genomes]
rs1428766	1.00[ASN][1000 genomes]
rs1428767	1.00[ASN][1000 genomes]
rs1428768	1.00[ASN][1000 genomes]
rs1428769	1.00[ASN][1000 genomes]
rs16968014	1.00[ASN][1000 genomes]
rs16968015	1.00[ASN][1000 genomes]
rs16968017	1.00[ASN][1000 genomes]
rs16968019	1.00[ASN][1000 genomes]
rs16968021	1.00[ASN][1000 genomes]
rs16968025	1.00[ASN][1000 genomes]
rs16968026	1.00[ASN][1000 genomes]
rs16968027	1.00[ASN][1000 genomes]
rs16968048	1.00[ASN][1000 genomes]
rs16968062	1.00[ASN][1000 genomes]
rs16968071	1.00[ASN][1000 genomes]
rs16968073	1.00[ASN][1000 genomes]
rs16968075	1.00[ASN][1000 genomes]
rs16968076	1.00[ASN][1000 genomes]
rs16968078	1.00[ASN][1000 genomes]
rs16968080	1.00[ASN][1000 genomes]
rs16968081	1.00[ASN][1000 genomes]
rs16968082	1.00[ASN][1000 genomes]
rs16968089	1.00[ASN][1000 genomes]
rs2331441	1.00[ASN][1000 genomes]
rs28514630	1.00[ASN][1000 genomes]
rs28699035	1.00[ASN][1000 genomes]
rs35330546	1.00[ASN][1000 genomes]
rs7184193	1.00[ASN][1000 genomes]
rs7185675	1.00[ASN][1000 genomes]
rs7198189	1.00[ASN][1000 genomes]
rs7203839	1.00[ASN][1000 genomes]
rs7204181	1.00[ASN][1000 genomes]
rs7205343	1.00[ASN][1000 genomes]
rs8046746	1.00[ASN][1000 genomes]
rs8046801	1.00[ASN][1000 genomes]
rs8047034	1.00[ASN][1000 genomes]
rs8047715	1.00[ASN][1000 genomes]
rs8047838	1.00[ASN][1000 genomes]
rs8047840	1.00[ASN][1000 genomes]
rs8048894	1.00[ASN][1000 genomes]
rs8049255	1.00[ASN][1000 genomes]
rs8051070	1.00[ASN][1000 genomes]
rs8051835	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948640	chr16:64859061-65112790	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv457512	chr16:64887354-64935433	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv572900	chr16:64887354-64935433	Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv984501	chr16:64919797-64993897	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64927800-64941800	Weak transcription	Osteobl	bone
2	chr16:64931200-64943800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr16:64935000-64943800	Weak transcription	Fetal Lung	lung

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