Variant report

Variant	rs142880121
Chromosome Location	chr7:14420818-14420819
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
3	esv3400522	chr7:14420243-14420828	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14417600-14421200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr7:14418600-14421200	Weak transcription	HSMM	muscle
3	chr7:14418600-14428400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr7:14419000-14421000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr7:14419000-14421200	Weak transcription	NHDF-Ad	bronchial
6	chr7:14420000-14421600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:14420000-14421800	Enhancers	Muscle Satellite Cultured Cells	--
8	chr7:14420400-14421800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr7:14420400-14422000	Enhancers	NHEK	skin
10	chr7:14420600-14421000	Enhancers	Osteobl	bone
11	chr7:14420600-14421400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr7:14420600-14421400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr7:14420600-14421400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr7:14420600-14421400	Enhancers	Pancreas	Pancrea
15	chr7:14420600-14421400	Enhancers	Placenta Amnion	Placenta Amnion
16	chr7:14420600-14421400	Enhancers	NH-A	brain
17	chr7:14420600-14422000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr7:14420800-14421200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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