Variant report

Variant	rs142912388
Chromosome Location	chr14:39854437-39854438
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFF	chr14:39854398-39854527	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
ENSG00000221645	TF binding region

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037183	chr14:39736939-39949233	Weak transcription Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv542048	chr14:39736939-39949233	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv983818	chr14:39853896-39855705	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39770800-39872400	Weak transcription	Colonic Mucosa	Colon
2	chr14:39818800-39867200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr14:39835400-39872400	Weak transcription	Fetal Muscle Leg	muscle
4	chr14:39836200-39872800	Weak transcription	Esophagus	oesophagus
5	chr14:39836400-39870600	Weak transcription	Gastric	stomach
6	chr14:39840000-39855000	Weak transcription	Fetal Stomach	stomach
7	chr14:39840000-39856000	Weak transcription	Fetal Intestine Small	intestine
8	chr14:39840000-39863200	Weak transcription	Fetal Muscle Trunk	muscle
9	chr14:39840000-39863400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr14:39840000-39864000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr14:39840000-39867000	Weak transcription	Left Ventricle	heart
12	chr14:39840000-39867400	Weak transcription	Pancreas	Pancrea
13	chr14:39840000-39882600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr14:39840200-39867200	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr14:39840600-39864400	Weak transcription	Primary B cells from peripheral blood	blood
16	chr14:39841000-39865800	Weak transcription	Primary B cells from cord blood	blood
17	chr14:39841200-39867000	Weak transcription	Duodenum Mucosa	Duodenum
18	chr14:39841400-39862800	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr14:39846200-39864800	Weak transcription	NHEK	skin
20	chr14:39846200-39878800	Weak transcription	Right Ventricle	heart
21	chr14:39846400-39857200	Weak transcription	Liver	Liver
22	chr14:39846400-39862400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr14:39846400-39864600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr14:39846400-39867200	Weak transcription	Primary hematopoietic stem cells	blood
25	chr14:39846600-39862600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr14:39846600-39864600	Weak transcription	HepG2	liver
27	chr14:39846600-39864600	Weak transcription	NH-A	brain
28	chr14:39846600-39864800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr14:39846600-39866600	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr14:39846800-39862600	Weak transcription	Adipose Nuclei	Adipose
31	chr14:39846800-39872400	Weak transcription	HSMMtube	muscle
32	chr14:39848000-39862600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr14:39850400-39870800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr14:39851000-39866800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr14:39851200-39866000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr14:39851200-39868600	Weak transcription	Brain Cingulate Gyrus	brain
37	chr14:39851400-39854600	Weak transcription	Aorta	Aorta
38	chr14:39851400-39868600	Weak transcription	Brain Hippocampus Middle	brain
39	chr14:39851400-39868600	Weak transcription	Brain Inferior Temporal Lobe	brain
40	chr14:39851600-39862400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
41	chr14:39851800-39864600	Weak transcription	Fetal Intestine Large	intestine
42	chr14:39852800-39863400	Weak transcription	Primary neutrophils fromperipheralblood	blood
43	chr14:39852800-39864600	Weak transcription	Dnd41	blood
44	chr14:39853000-39867400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr14:39853000-39867400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
46	chr14:39853200-39866200	Weak transcription	GM12878-XiMat	blood
47	chr14:39853200-39867800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
48	chr14:39853600-39856800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
49	chr14:39853600-39862800	Weak transcription	Primary T helper cells fromperipheralblood	blood
50	chr14:39853600-39866200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood

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