Variant report

Variant	rs142925274
Chromosome Location	chr11:32961097-32961098
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32921334..32923209-chr11:32959403..32961555,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758262	chr11:32714643-33049940	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
2	esv2759815	chr11:32714643-33049940	Flanking Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
3	esv34742	chr11:32796092-33004024	Weak transcription Strong transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
4	esv2753057	chr11:32796124-33061724	Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
5	esv2753743	chr11:32796124-33084924	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
6	nsv1040484	chr11:32951066-33093204	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
7	nsv1046198	chr11:32954100-33075142	Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
8	esv3358675	chr11:32960425-32981454	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32948400-32962000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:32948400-32963200	Strong transcription	HUES6 Cell Line	embryonic stem cell
3	chr11:32950200-32968000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr11:32950400-32962600	Strong transcription	HUES64 Cell Line	embryonic stem cell
5	chr11:32950400-32994400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr11:32951000-32962200	Strong transcription	Dnd41	blood
7	chr11:32951200-32962600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
8	chr11:32951600-32963200	Strong transcription	H1 Cell Line	embryonic stem cell
9	chr11:32952000-32963200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr11:32952200-32962600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
11	chr11:32952400-32968000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr11:32952600-32961800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr11:32952800-32962000	Strong transcription	Primary B cells from cord blood	blood
14	chr11:32952800-32963200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr11:32953800-32978400	Weak transcription	Fetal Intestine Small	intestine
16	chr11:32954000-32968000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr11:32954200-32968000	Weak transcription	Fetal Stomach	stomach
18	chr11:32954400-32962000	Weak transcription	Brain Angular Gyrus	brain
19	chr11:32954600-32971400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr11:32954600-32990200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr11:32954800-32961200	Weak transcription	Aorta	Aorta
22	chr11:32954800-32968000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr11:32955000-32968600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr11:32955200-32961600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
25	chr11:32955200-32962400	Weak transcription	Rectal Smooth Muscle	rectum
26	chr11:32955400-32994200	Weak transcription	Gastric	stomach
27	chr11:32955400-32994400	Weak transcription	Esophagus	oesophagus
28	chr11:32955600-32961200	Weak transcription	Small Intestine	intestine
29	chr11:32955600-32961400	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr11:32955600-32968000	Weak transcription	Pancreas	Pancrea
31	chr11:32955600-32987200	Weak transcription	Right Ventricle	heart
32	chr11:32955600-33000800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
33	chr11:32955600-33003800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
34	chr11:32955800-32961200	Weak transcription	Ovary	ovary
35	chr11:32956000-32975400	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr11:32956200-32961600	Weak transcription	Fetal Heart	heart
37	chr11:32956200-32979400	Weak transcription	Colon Smooth Muscle	Colon
38	chr11:32956200-32994200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr11:32956800-32961400	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr11:32956800-32968000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr11:32956800-32968000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr11:32956800-32968000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr11:32956800-32975400	Weak transcription	Lung	lung
44	chr11:32956800-32975400	Weak transcription	Rectal Mucosa Donor 29	rectum
45	chr11:32956800-32975400	Weak transcription	NHEK	skin
46	chr11:32956800-32977800	Weak transcription	Left Ventricle	heart
47	chr11:32956800-32977800	Weak transcription	Thymus	Thymus
48	chr11:32956800-32994200	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr11:32957000-32969400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
50	chr11:32957000-32978400	Weak transcription	Duodenum Mucosa	Duodenum

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