Variant report

Variant	rs1429929
Chromosome Location	chr2:167960107-167960108
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10497305	0.89[MKK][hapmap]
rs11888129	1.00[ASW][hapmap];1.00[YRI][hapmap]
rs6706598	1.00[YRI][hapmap]
rs7579123	1.00[YRI][hapmap];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167958600-167961000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:167958800-167960200	Enhancers	HepG2	liver
3	chr2:167959200-167960200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr2:167959600-167960600	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr2:167959600-167960600	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr2:167959800-167960200	Enhancers	HMEC	breast
7	chr2:167959800-167960600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr2:167959800-167961000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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