Variant report

Variant	rs143173517
Chromosome Location	chr22:33295713-33295714
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000184708	Chromatin interaction
ENSG00000100225	Chromatin interaction
ENSG00000100170	Chromatin interaction
ENSG00000199248	Chromatin interaction
ENSG00000198089	Chromatin interaction
ENSG00000185666	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2638943	chr22:33295280-33296930	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	esv3442324	chr22:33295418-33296146	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	esv6171	chr22:33295524-33296351	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
4	esv2280543	chr22:33295571-33296139	Enhancers Weak transcription	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
5	esv2042529	chr22:33295603-33296286	Enhancers Weak transcription	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
6	esv3455801	chr22:33295643-33296163	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
7	esv3510996	chr22:33295665-33296187	Enhancers Weak transcription	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
8	esv3510992	chr22:33295671-33296176	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
9	esv3917	chr22:33295684-33296197	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
10	esv3510991	chr22:33295688-33296113	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
11	esv3455800	chr22:33295702-33296146	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
12	esv3455802	chr22:33295708-33296104	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
13	esv3510995	chr22:33295708-33296134	Weak transcription Enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33277000-33302000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr22:33283600-33299600	Weak transcription	Right Atrium	heart
3	chr22:33287800-33309600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr22:33287800-33312000	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr22:33289000-33297200	Weak transcription	Fetal Heart	heart
6	chr22:33290000-33312000	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr22:33293600-33301400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr22:33293800-33297400	Weak transcription	K562	blood
9	chr22:33294000-33297800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr22:33294400-33296800	Weak transcription	Fetal Intestine Large	intestine
11	chr22:33294600-33296600	Weak transcription	Fetal Intestine Small	intestine
12	chr22:33294600-33297600	Weak transcription	Placenta	Placenta
13	chr22:33295200-33296400	Enhancers	Primary hematopoietic stem cells	blood
14	chr22:33295200-33296400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr22:33295400-33296400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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