Variant report

Variant	rs143216436
Chromosome Location	chr4:151422669-151422670
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880256	chr4:151126725-151751369	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv817540	chr4:151228965-151858609	Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv830112	chr4:151243801-151431771	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv869051	chr4:151347901-151737781	Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1024820	chr4:151364078-151943561	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
6	esv3445246	chr4:151422396-151447936	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:151385400-151442200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr4:151387800-151423000	Weak transcription	Colon Smooth Muscle	Colon
3	chr4:151392200-151424400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr4:151395400-151424000	Weak transcription	Primary hematopoietic stem cells	blood
5	chr4:151400000-151434200	Weak transcription	Primary T cells from cord blood	blood
6	chr4:151409000-151456600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr4:151410000-151444400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr4:151412000-151424200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr4:151412200-151424200	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr4:151419200-151423800	Weak transcription	Fetal Intestine Small	intestine
11	chr4:151419200-151431000	Weak transcription	Fetal Stomach	stomach
12	chr4:151419200-151436000	Weak transcription	Stomach Mucosa	stomach
13	chr4:151421800-151422800	Enhancers	Muscle Satellite Cultured Cells	--
14	chr4:151421800-151423400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr4:151422000-151422800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr4:151422000-151423400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr4:151422000-151423600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr4:151422000-151423800	Enhancers	Osteobl	bone
19	chr4:151422000-151424000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr4:151422200-151422800	Strong transcription	Primary B cells from cord blood	blood
21	chr4:151422200-151422800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr4:151422200-151423400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr4:151422400-151422800	Enhancers	Aorta	Aorta
24	chr4:151422400-151422800	Enhancers	Psoas Muscle	Psoas
25	chr4:151422400-151422800	Enhancers	HMEC	breast
26	chr4:151422400-151423200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr4:151422400-151423200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr4:151422400-151423200	Enhancers	Adipose Nuclei	Adipose
29	chr4:151422400-151423600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr4:151422400-151423600	Enhancers	NHDF-Ad	bronchial
31	chr4:151422600-151422800	Enhancers	Pancreatic Islets	Pancreatic Islet
32	chr4:151422600-151438400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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