The 2.0 version of rSNPBase

Variant report

Variant rs143511062
Chromosome Location chr10:89852283-89852284
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89836600-89852400 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr10:89839400-89855000 Weak transcription Lung lung
3 chr10:89848800-89852800 Enhancers HMEC breast
4 chr10:89848800-89856200 Enhancers Fetal Thymus thymus
5 chr10:89849400-89852800 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr10:89849400-89852800 Weak transcription Pancreas Pancrea
7 chr10:89849400-89853200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr10:89849400-89853400 Enhancers Primary T helper cells PMA-I stimulated --
9 chr10:89849400-89854200 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr10:89849400-89854600 Enhancers Primary monocytes fromperipheralblood blood
11 chr10:89849600-89852400 Weak transcription Adipose Nuclei Adipose
12 chr10:89849600-89852600 Weak transcription Fetal Lung lung
13 chr10:89849600-89853200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr10:89849600-89853200 Enhancers Primary T helper naive cells from peripheral blood blood
15 chr10:89849600-89853200 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr10:89849600-89853400 Enhancers Primary T helper cells fromperipheralblood blood
17 chr10:89849600-89853600 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr10:89849800-89852800 Enhancers Primary hematopoietic stem cells blood
19 chr10:89850000-89852400 Weak transcription Left Ventricle heart
20 chr10:89850000-89852600 Weak transcription Liver Liver
21 chr10:89850000-89853000 Enhancers Primary B cells from peripheral blood blood
22 chr10:89850000-89853200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr10:89850000-89853400 Enhancers Primary T cells from cord blood blood
24 chr10:89850200-89852400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr10:89850200-89853400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr10:89850200-89854200 Enhancers Primary T cells fromperipheralblood blood
27 chr10:89850400-89852800 Enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr10:89850400-89853400 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr10:89850400-89854600 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr10:89850600-89852800 Weak transcription Esophagus oesophagus
31 chr10:89850600-89853000 Enhancers NHEK skin
32 chr10:89850800-89852400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr10:89851000-89853000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr10:89851600-89852400 Flanking Active TSS GM12878-XiMat blood
35 chr10:89851800-89852800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr10:89851800-89853400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
37 chr10:89851800-89853600 Enhancers Monocytes-CD14+_RO01746 blood
38 chr10:89851800-89857400 Enhancers Dnd41 blood
39 chr10:89852000-89852400 Weak transcription Thymus Thymus
40 chr10:89852000-89854800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr10:89852200-89852400 Flanking Active TSS Primary B cells from cord blood blood
42 chr10:89852200-89852400 Enhancers Pancreatic Islets Pancreatic Islet
43 chr10:89852200-89855400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015