Variant report

Variant	rs143572502
Chromosome Location	chr2:36623715-36623716
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:36622875..36625167-chr2:36629133..36630867,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833803	chr2:36589065-36745779	Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2756915	chr2:36622906-36657305	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv2759041	chr2:36622906-36657305	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:87 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:36586200-36626600	Weak transcription	Primary B cells from cord blood	blood
2	chr2:36604400-36640400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr2:36604400-36640600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr2:36611600-36632400	Weak transcription	Esophagus	oesophagus
5	chr2:36611600-36635400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr2:36613000-36624000	Weak transcription	Small Intestine	intestine
7	chr2:36616800-36624200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr2:36616800-36631200	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr2:36616800-36635000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr2:36617000-36633400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr2:36617200-36623800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr2:36617200-36624000	Weak transcription	Fetal Intestine Large	intestine
13	chr2:36617200-36624000	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr2:36617200-36625000	Weak transcription	Fetal Intestine Small	intestine
15	chr2:36617200-36630800	Weak transcription	Rectal Smooth Muscle	rectum
16	chr2:36617200-36631200	Weak transcription	Fetal Kidney	kidney
17	chr2:36617200-36633800	Weak transcription	Fetal Lung	lung
18	chr2:36617600-36624000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr2:36617800-36630600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr2:36617800-36630600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr2:36618200-36624000	Weak transcription	Primary hematopoietic stem cells	blood
22	chr2:36618600-36643000	Genic enhancers	Osteobl	bone
23	chr2:36619800-36625400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr2:36620200-36626400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr2:36620200-36635000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr2:36620400-36624000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr2:36620800-36624000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr2:36620800-36629200	Genic enhancers	Muscle Satellite Cultured Cells	--
29	chr2:36621000-36624000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr2:36621000-36624000	Weak transcription	Left Ventricle	heart
31	chr2:36621000-36630600	Weak transcription	Cortex derived primary cultured neurospheres	brain
32	chr2:36621000-36631400	Weak transcription	Fetal Brain Female	brain
33	chr2:36621000-36635000	Weak transcription	Stomach Smooth Muscle	stomach
34	chr2:36621000-36635200	Weak transcription	Lung	lung
35	chr2:36621200-36623800	Weak transcription	Brain Anterior Caudate	brain
36	chr2:36621200-36624000	Weak transcription	Psoas Muscle	Psoas
37	chr2:36621200-36624200	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr2:36621200-36625000	Weak transcription	Right Ventricle	heart
39	chr2:36621200-36628000	Weak transcription	Ovary	ovary
40	chr2:36621200-36629000	Weak transcription	Fetal Muscle Leg	muscle
41	chr2:36621200-36630800	Weak transcription	Spleen	Spleen
42	chr2:36621200-36634800	Weak transcription	Brain Hippocampus Middle	brain
43	chr2:36621200-36634800	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr2:36621200-36635000	Weak transcription	Fetal Stomach	stomach
45	chr2:36621600-36623800	Weak transcription	HUES64 Cell Line	embryonic stem cell
46	chr2:36621600-36624000	Weak transcription	Adipose Nuclei	Adipose
47	chr2:36622000-36623800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr2:36622000-36626400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr2:36622200-36623800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
50	chr2:36622200-36624800	Enhancers	Rectal Mucosa Donor 29	rectum

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