Variant report

Variant	rs1436901
Chromosome Location	chr1:217064050-217064051
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1436883	1.00[GIH][hapmap]
rs6698423	1.00[GIH][hapmap]
rs7538877	1.00[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873179	chr1:217056893-217112871	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217058200-217067600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr1:217058400-217065200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:217058400-217067800	Weak transcription	Small Intestine	intestine
4	chr1:217058600-217067800	Weak transcription	Fetal Kidney	kidney
5	chr1:217058800-217066000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr1:217062600-217067600	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr1:217062600-217078000	Weak transcription	Pancreas	Pancrea
8	chr1:217062800-217065200	Weak transcription	Fetal Intestine Small	intestine
9	chr1:217062800-217066000	Weak transcription	Psoas Muscle	Psoas
10	chr1:217062800-217067400	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr1:217062800-217068000	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr1:217062800-217068000	Weak transcription	Left Ventricle	heart
13	chr1:217062800-217076000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr1:217062800-217076200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr1:217062800-217087800	Weak transcription	Fetal Muscle Leg	muscle
16	chr1:217063000-217065600	Weak transcription	Fetal Intestine Large	intestine
17	chr1:217063000-217066200	Weak transcription	Fetal Heart	heart
18	chr1:217064000-217064200	Flanking Active TSS	Fetal Brain Male	brain
19	chr1:217064000-217065600	Weak transcription	Duodenum Mucosa	Duodenum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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