Variant report
| Variant | rs143690480 |
|---|---|
| Chromosome Location | chr18:29886583-29886584 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:29868000-29888800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr18:29868000-29888800 | Weak transcription | Brain Hippocampus Middle | brain |
| 3 | chr18:29868000-29889000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr18:29868000-29889000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 5 | chr18:29868200-29889800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 6 | chr18:29868200-29923800 | Weak transcription | Gastric | stomach |
| 7 | chr18:29878400-29888800 | Weak transcription | Liver | Liver |
| 8 | chr18:29878400-29890000 | Weak transcription | Fetal Kidney | kidney |
| 9 | chr18:29878400-29896000 | Weak transcription | Brain Anterior Caudate | brain |
| 10 | chr18:29878600-29888000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr18:29878600-29890200 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr18:29878800-29890000 | Weak transcription | Fetal Brain Male | brain |
| 13 | chr18:29880800-29897000 | Weak transcription | Lung | lung |
| 14 | chr18:29881600-29892200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 15 | chr18:29881800-29888800 | Weak transcription | Fetal Stomach | stomach |
| 16 | chr18:29882000-29888200 | Weak transcription | HSMM | muscle |
| 17 | chr18:29882200-29888800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 18 | chr18:29882200-29888800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 19 | chr18:29882200-29890000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 20 | chr18:29882600-29888200 | Weak transcription | NHEK | skin |
| 21 | chr18:29882800-29888200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 22 | chr18:29882800-29888600 | Weak transcription | NH-A | brain |
| 23 | chr18:29882800-29888800 | Weak transcription | Small Intestine | intestine |
| 24 | chr18:29882800-29889000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 25 | chr18:29882800-29890000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 26 | chr18:29883000-29888000 | Weak transcription | HMEC | breast |
| 27 | chr18:29883000-29888200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 28 | chr18:29883000-29888400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 29 | chr18:29883000-29888800 | Weak transcription | HSMMtube | muscle |
| 30 | chr18:29883000-29890800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 31 | chr18:29883000-29891400 | Weak transcription | Adipose Nuclei | Adipose |
| 32 | chr18:29883000-29891600 | Weak transcription | Pancreas | Pancrea |
| 33 | chr18:29883000-29895800 | Weak transcription | Stomach Mucosa | stomach |
| 34 | chr18:29883000-29897000 | Weak transcription | Fetal Intestine Small | intestine |
| 35 | chr18:29883000-29897000 | Weak transcription | Left Ventricle | heart |
| 36 | chr18:29883200-29888000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 37 | chr18:29883200-29889000 | Weak transcription | NHDF-Ad | bronchial |
| 38 | chr18:29883400-29888200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 39 | chr18:29883400-29889000 | Weak transcription | Fetal Muscle Leg | muscle |
| 40 | chr18:29883400-29896800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 41 | chr18:29883600-29888200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr18:29883800-29888800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 43 | chr18:29883800-29888800 | Weak transcription | Aorta | Aorta |
| 44 | chr18:29883800-29888800 | Weak transcription | Right Atrium | heart |
| 45 | chr18:29883800-29888800 | Weak transcription | Right Ventricle | heart |
| 46 | chr18:29883800-29893000 | Weak transcription | Fetal Heart | heart |
| 47 | chr18:29885800-29886600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 48 | chr18:29886400-29889200 | Weak transcription | Spleen | Spleen |
