Variant report

Variant	rs143707988
Chromosome Location	chr1:216913909-216913910
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508694	chr1:216901014-216923883	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
2	esv3391131	chr1:216913679-216915827	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216897400-216958600	Weak transcription	Pancreas	Pancrea
2	chr1:216911600-216934200	Weak transcription	Psoas Muscle	Psoas
3	chr1:216912200-216914400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr1:216912600-216914000	Enhancers	Fetal Heart	heart
5	chr1:216912800-216914400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr1:216913000-216914000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
7	chr1:216913000-216914200	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
8	chr1:216913000-216914400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
9	chr1:216913200-216914000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr1:216913200-216914200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr1:216913400-216914000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr1:216913400-216914400	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr1:216913400-216914600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr1:216913600-216914000	Active TSS	iPS-20b Cell Line	embryonic stem cell
15	chr1:216913600-216914000	Enhancers	Brain Germinal Matrix	brain
16	chr1:216913800-216914200	Enhancers	Fetal Brain Female	brain
17	chr1:216913800-216914400	Enhancers	iPS-15b Cell Line	embryonic stem cell
18	chr1:216913800-216914800	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr1:216913800-216915000	Enhancers	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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