Variant report

Variant rs143729497
Chromosome Location chr16:30198804-30198805
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:30195000-30205800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr16:30195200-30199400 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
3 chr16:30195400-30199200 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
4 chr16:30195600-30199200 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
5 chr16:30195600-30199600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
6 chr16:30195800-30199000 Enhancers K562 blood
7 chr16:30195800-30199800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr16:30196000-30199000 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
9 chr16:30196000-30199000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr16:30196000-30199000 Transcr. at gene 5' and 3' Fetal Thymus thymus
11 chr16:30196000-30199800 Transcr. at gene 5' and 3' GM12878-XiMat blood
12 chr16:30196000-30200600 Weak transcription Placenta Amnion Placenta Amnion
13 chr16:30196000-30205800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr16:30196200-30199000 Enhancers HepG2 liver
15 chr16:30196200-30199600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr16:30196200-30199600 Weak transcription Fetal Lung lung
17 chr16:30196200-30201000 Weak transcription NHEK skin
18 chr16:30196400-30205800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr16:30196400-30205800 Weak transcription Brain Substantia Nigra brain
20 chr16:30196400-30205800 Weak transcription Right Atrium heart
21 chr16:30196600-30199000 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
22 chr16:30197000-30199200 Enhancers Placenta Placenta
23 chr16:30197200-30199000 Enhancers Fetal Muscle Trunk muscle
24 chr16:30197200-30199200 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
25 chr16:30197200-30205800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr16:30197200-30205800 Weak transcription Brain Anterior Caudate brain
27 chr16:30197400-30199000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
28 chr16:30197400-30199000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr16:30197400-30199800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
30 chr16:30197400-30201400 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr16:30197600-30199000 Enhancers Skeletal Muscle Female skeletal muscle
32 chr16:30197600-30199400 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
33 chr16:30197600-30199600 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
34 chr16:30197600-30199600 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
35 chr16:30197600-30199800 Genic enhancers Spleen Spleen
36 chr16:30197800-30199000 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 2 blood
37 chr16:30197800-30199000 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr16:30197800-30199400 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr16:30197800-30199400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr16:30197800-30199600 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
41 chr16:30197800-30199800 Strong transcription Fetal Stomach stomach
42 chr16:30198000-30199000 Genic enhancers Fetal Muscle Leg muscle
43 chr16:30198000-30199200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr16:30198000-30199200 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
45 chr16:30198000-30199800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
46 chr16:30198000-30199800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr16:30198200-30199000 Enhancers Stomach Mucosa stomach
48 chr16:30198200-30199600 Strong transcription NHLF lung
49 chr16:30198200-30199800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr16:30198200-30199800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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