Variant report

Variant	rs143787112
Chromosome Location	chr4:20448554-20448555
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878741	chr4:20440476-20486230	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv527095	chr4:20447040-20455955	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20444000-20449000	Enhancers	Colon Smooth Muscle	Colon
2	chr4:20444200-20449600	Enhancers	Fetal Lung	lung
3	chr4:20446200-20449200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:20447000-20448800	Enhancers	NHDF-Ad	bronchial
5	chr4:20447200-20448600	Enhancers	Rectal Smooth Muscle	rectum
6	chr4:20447400-20449400	Enhancers	Fetal Stomach	stomach
7	chr4:20447800-20448600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:20447800-20454000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr4:20447800-20457800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr4:20448000-20449000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr4:20448000-20454000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr4:20448000-20456600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr4:20448200-20449400	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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