Variant report

Variant	rs143942612
Chromosome Location	chr12:117643085-117643086
allele	-/CTGT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832526	chr12:117530234-117723821	Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv510592	chr12:117618872-117684713	Bivalent/Poised TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
3	esv3498541	chr12:117639969-117644967	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3500134	chr12:117640219-117644417	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv3500135	chr12:117640219-117644417	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3498552	chr12:117640879-117643722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3498563	chr12:117640879-117643722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
8	nsv52574	chr12:117640973-117643553	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv21122	chr12:117641095-117643946	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	nsv560360	chr12:117641229-117650873	Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv1846026	chr12:117641314-117650873	Enhancers Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
12	nsv560374	chr12:117641786-117650873	Enhancers Flanking Active TSS Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
13	nsv560382	chr12:117641949-117650873	Enhancers Flanking Active TSS Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117633600-117645000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:117642200-117648000	Weak transcription	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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