Variant report

Variant	rs144113482
Chromosome Location	chr1:210071245-210071246
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999901	chr1:209600631-210205379	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
2	nsv1014034	chr1:209759648-210501731	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	esv1821635	chr1:210068117-210085756	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv873140	chr1:210068117-210335644	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
5	nsv4354	chr1:210070574-210100783	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210069600-210073400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr1:210069800-210073800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr1:210070000-210073600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:210070000-210073600	Weak transcription	HSMM	muscle
5	chr1:210070200-210073400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr1:210070200-210073400	Weak transcription	NHDF-Ad	bronchial
7	chr1:210070200-210073600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr1:210070200-210073600	Weak transcription	HSMMtube	muscle
9	chr1:210070200-210074000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr1:210070200-210074200	Weak transcription	HUVEC	blood vessel
11	chr1:210070400-210073400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr1:210070400-210073400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr1:210070600-210073400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr1:210070600-210073400	Weak transcription	Osteobl	bone
15	chr1:210070800-210071400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr1:210070800-210073000	Weak transcription	NHEK	skin
17	chr1:210070800-210073200	Weak transcription	Hela-S3	cervix
18	chr1:210070800-210073400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr1:210070800-210074000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr1:210071000-210073000	Weak transcription	HMEC	breast
21	chr1:210071000-210073400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr1:210071200-210073200	Weak transcription	NH-A	brain

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