Variant report

Variant	rs144152368
Chromosome Location	chr6:33919594-33919595
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916210	chr6:33804111-34144062	Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
2	nsv462899	chr6:33880480-33944014	Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv602841	chr6:33880480-33944014	Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv5252	chr6:33919447-33955380	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33917800-33919600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:33917800-33919600	Enhancers	Fetal Intestine Small	intestine
3	chr6:33917800-33920000	Enhancers	Fetal Intestine Large	intestine
4	chr6:33918200-33919600	Enhancers	H1 Cell Line	embryonic stem cell
5	chr6:33918200-33919600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr6:33918800-33919600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr6:33918800-33924400	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr6:33919200-33919600	Bivalent Enhancer	Right Ventricle	heart
9	chr6:33919200-33926200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr6:33919400-33920600	Weak transcription	HUES6 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links