Variant report

Variant	rs144304518
Chromosome Location	chr1:217271038-217271039
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428610	chr1:217143317-217307243	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3326106	chr1:217270420-217271648	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217264000-217271800	Weak transcription	Pancreas	Pancrea
2	chr1:217266200-217271200	Weak transcription	Fetal Heart	heart
3	chr1:217266200-217271400	Weak transcription	Fetal Intestine Small	intestine
4	chr1:217266200-217271800	Weak transcription	Fetal Intestine Large	intestine
5	chr1:217270400-217271400	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr1:217270600-217272200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr1:217270600-217278200	Weak transcription	Fetal Muscle Leg	muscle
8	chr1:217271000-217271400	Enhancers	Adipose Nuclei	Adipose

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links