The 2.0 version of rSNPBase

Variant report

Variant rs144384535
Chromosome Location chr12:76883815-76883816
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:76844800-76884000 Weak transcription Fetal Thymus thymus
2 chr12:76863400-76884000 Weak transcription Lung lung
3 chr12:76864200-76884000 Weak transcription Primary T cells fromperipheralblood blood
4 chr12:76864200-76884000 Weak transcription Fetal Muscle Leg muscle
5 chr12:76864200-76884000 Weak transcription Psoas Muscle Psoas
6 chr12:76864400-76884600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr12:76864400-76886200 Weak transcription Brain Inferior Temporal Lobe brain
8 chr12:76864400-76886200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr12:76864600-76886600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr12:76864600-76889400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr12:76865000-76886000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr12:76865000-76886600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr12:76865200-76884400 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr12:76865200-76891200 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr12:76865200-76912000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr12:76865400-76909200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr12:76865600-76889400 Weak transcription NHEK skin
18 chr12:76865800-76884000 Weak transcription HSMM muscle
19 chr12:76865800-76886800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr12:76866800-76885000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr12:76869000-76884600 Weak transcription Esophagus oesophagus
22 chr12:76869600-76884000 Weak transcription Colon Smooth Muscle Colon
23 chr12:76869800-76884000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:76869800-76884200 Weak transcription Left Ventricle heart
25 chr12:76869800-76884400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr12:76869800-76884600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr12:76869800-76895400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr12:76869800-76897800 Weak transcription Fetal Heart heart
29 chr12:76871000-76945400 Weak transcription Gastric stomach
30 chr12:76871200-76884000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr12:76871400-76884200 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr12:76871400-76884600 Weak transcription GM12878-XiMat blood
33 chr12:76873000-76886600 Weak transcription Brain Hippocampus Middle brain
34 chr12:76873200-76884000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr12:76875200-76884000 Weak transcription Primary hematopoietic stem cells blood
36 chr12:76875200-76884600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr12:76875200-76886200 Weak transcription Small Intestine intestine
38 chr12:76875200-76886800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr12:76875200-76922400 Weak transcription K562 blood
40 chr12:76875400-76884600 Weak transcription Adipose Nuclei Adipose
41 chr12:76875600-76884000 Weak transcription Fetal Stomach stomach
42 chr12:76876200-76884600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr12:76876200-76887600 Weak transcription Colonic Mucosa Colon
44 chr12:76876400-76887000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr12:76876600-76887600 Weak transcription HepG2 liver
46 chr12:76876800-76912200 Weak transcription Spleen Spleen
47 chr12:76877400-76884000 Weak transcription Fetal Intestine Small intestine
48 chr12:76877400-76891400 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr12:76878200-76884200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr12:76878200-76886200 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015