Variant report

Variant rs144642892
Chromosome Location chr5:179040802-179040803
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178987600-179045600 Strong transcription Fetal Intestine Small intestine
2 chr5:178987800-179045600 Strong transcription iPS-20b Cell Line embryonic stem cell
3 chr5:179002200-179045600 Strong transcription Fetal Intestine Large intestine
4 chr5:179007400-179045000 Strong transcription HUES64 Cell Line embryonic stem cell
5 chr5:179011000-179045600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr5:179011200-179043800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr5:179012600-179047000 Strong transcription H1 Cell Line embryonic stem cell
8 chr5:179013800-179044800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr5:179014000-179042000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr5:179014000-179044400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr5:179014000-179046000 Strong transcription Cortex derived primary cultured neurospheres brain
12 chr5:179016000-179041800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr5:179016200-179045000 Strong transcription Placenta Amnion Placenta Amnion
14 chr5:179025200-179045000 Strong transcription Sigmoid Colon Sigmoid Colon
15 chr5:179028200-179046200 Strong transcription Primary monocytes fromperipheralblood blood
16 chr5:179028400-179046000 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr5:179028600-179046200 Strong transcription HUES48 Cell Line embryonic stem cell
18 chr5:179028800-179045000 Strong transcription Muscle Satellite Cultured Cells --
19 chr5:179029200-179045600 Strong transcription Primary B cells from cord blood blood
20 chr5:179031000-179041000 Genic enhancers Fetal Muscle Leg muscle
21 chr5:179031000-179045600 Strong transcription Osteobl bone
22 chr5:179031000-179046200 Strong transcription Primary B cells from peripheral blood blood
23 chr5:179032200-179045800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr5:179032200-179046400 Strong transcription iPS-18 Cell Line embryonic stem cell
25 chr5:179032400-179045600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr5:179032400-179047400 Strong transcription H9 Cell Line embryonic stem cell
27 chr5:179032800-179045000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr5:179033600-179046000 Strong transcription Rectal Mucosa Donor 29 rectum
29 chr5:179034200-179046600 Strong transcription Colonic Mucosa Colon
30 chr5:179034600-179043000 Weak transcription Right Atrium heart
31 chr5:179035000-179043000 Strong transcription NH-A brain
32 chr5:179035200-179044400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:179035200-179045200 Strong transcription Fetal Brain Female brain
34 chr5:179035400-179041400 Strong transcription Aorta Aorta
35 chr5:179035400-179043200 Strong transcription GM12878-XiMat blood
36 chr5:179035600-179043000 Strong transcription Dnd41 blood
37 chr5:179035600-179043400 Strong transcription Hela-S3 cervix
38 chr5:179035600-179045000 Strong transcription Brain Substantia Nigra brain
39 chr5:179035600-179045000 Strong transcription Thymus Thymus
40 chr5:179035600-179045200 Strong transcription Brain Hippocampus Middle brain
41 chr5:179035800-179042000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr5:179035800-179043200 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr5:179035800-179046200 Strong transcription Brain Inferior Temporal Lobe brain
44 chr5:179036000-179042600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr5:179036000-179043000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr5:179036000-179045200 Strong transcription NHEK skin
47 chr5:179036000-179046000 Strong transcription iPS-15b Cell Line embryonic stem cell
48 chr5:179036200-179042800 Strong transcription Brain Cingulate Gyrus brain
49 chr5:179036200-179043000 Strong transcription Brain Germinal Matrix brain
50 chr5:179036200-179045200 Strong transcription Brain Angular Gyrus brain

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