Variant report

Variant rs144675609
Chromosome Location chr2:11648393-11648394
allele -/TTTTTTTTTT
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11639600-11655000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr2:11641400-11651600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:11641400-11653200 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr2:11641600-11653800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:11643400-11651200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:11644000-11651800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr2:11644800-11648400 Enhancers Ovary ovary
8 chr2:11645200-11651800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr2:11646200-11648400 Enhancers Skeletal Muscle Male skeletal muscle
10 chr2:11646200-11648600 Enhancers Fetal Muscle Trunk muscle
11 chr2:11646200-11648800 Enhancers Brain Cingulate Gyrus brain
12 chr2:11646200-11648800 Enhancers Fetal Muscle Leg muscle
13 chr2:11646200-11649000 Enhancers Cortex derived primary cultured neurospheres brain
14 chr2:11646200-11649000 Enhancers Brain Inferior Temporal Lobe brain
15 chr2:11646400-11648800 Enhancers Brain Anterior Caudate brain
16 chr2:11646400-11648800 Enhancers Brain Substantia Nigra brain
17 chr2:11646400-11651600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:11646400-11653800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr2:11646600-11648800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr2:11646600-11649000 Enhancers Liver Liver
21 chr2:11647000-11648600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:11647000-11664400 Weak transcription Right Ventricle heart
23 chr2:11647000-11665800 Weak transcription Right Atrium heart
24 chr2:11647400-11648800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:11647400-11648800 Enhancers Fetal Stomach stomach
26 chr2:11647400-11651000 Genic enhancers HepG2 liver
27 chr2:11647600-11648400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:11647600-11648400 Enhancers Brain Angular Gyrus brain
29 chr2:11647600-11648800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr2:11647800-11648400 Enhancers Brain Germinal Matrix brain
31 chr2:11647800-11648600 Enhancers Duodenum Mucosa Duodenum
32 chr2:11647800-11648600 Enhancers Fetal Intestine Small intestine
33 chr2:11647800-11648600 Enhancers Stomach Smooth Muscle stomach
34 chr2:11647800-11648800 Enhancers Colon Smooth Muscle Colon
35 chr2:11647800-11648800 Enhancers Fetal Lung lung
36 chr2:11647800-11649400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr2:11648000-11648400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:11648000-11648400 Weak transcription Left Ventricle heart
39 chr2:11648000-11651400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr2:11648200-11648400 Flanking Active TSS Brain Hippocampus Middle brain
41 chr2:11648200-11648400 Enhancers Fetal Heart heart
42 chr2:11648200-11648600 Enhancers Stomach Mucosa stomach
43 chr2:11648200-11650600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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