Variant report

Variant	rs1447685
Chromosome Location	chr3:134415434-134415435
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:134412754..134415691-chr3:134416793..134419769,2	MCF-7	breast:
2	chr3:134415377..134418042-chr3:134431451..134433591,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10935127	1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12486490	1.00[AFR][1000 genomes]
rs13074091	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1345166	0.95[EUR][1000 genomes]
rs1447681	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1447684	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34011503	1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs35026342	1.00[AFR][1000 genomes]
rs35097157	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4955449	1.00[AFR][1000 genomes]
rs4955472	0.95[EUR][1000 genomes]
rs4955481	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4955484	1.00[AFR][1000 genomes]
rs6781259	0.95[EUR][1000 genomes]
rs6781968	0.95[EUR][1000 genomes]
rs71331770	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7624785	0.95[EUR][1000 genomes]
rs7633087	0.95[EUR][1000 genomes]
rs7644265	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9851209	0.95[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134407600-134416200	Weak transcription	Psoas Muscle	Psoas
2	chr3:134410000-134419000	Enhancers	Fetal Muscle Leg	muscle
3	chr3:134411600-134420600	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr3:134412600-134416600	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr3:134413000-134418200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr3:134413400-134417200	Weak transcription	Right Atrium	heart
7	chr3:134413400-134417400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr3:134413600-134416400	Weak transcription	Fetal Muscle Trunk	muscle
9	chr3:134413800-134417000	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr3:134414000-134416600	Weak transcription	Brain Substantia Nigra	brain
11	chr3:134414000-134416800	Weak transcription	Brain Anterior Caudate	brain
12	chr3:134414000-134417000	Weak transcription	Brain Hippocampus Middle	brain
13	chr3:134414000-134417000	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr3:134414000-134417400	Weak transcription	Brain Cingulate Gyrus	brain
15	chr3:134414000-134418000	Enhancers	Fetal Heart	heart
16	chr3:134414600-134415600	Enhancers	Rectal Smooth Muscle	rectum
17	chr3:134414600-134417200	Enhancers	Stomach Smooth Muscle	stomach
18	chr3:134415000-134416400	Weak transcription	Right Ventricle	heart
19	chr3:134415000-134416800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr3:134415000-134416800	Weak transcription	Esophagus	oesophagus
21	chr3:134415200-134416200	Weak transcription	Left Ventricle	heart
22	chr3:134415200-134416400	Weak transcription	Colon Smooth Muscle	Colon

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