The 2.0 version of rSNPBase

Variant report

Variant rs144864245
Chromosome Location chr10:49595981-49595982
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:49587600-49599600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr10:49590200-49596400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr10:49590200-49596800 Weak transcription Left Ventricle heart
4 chr10:49590200-49598400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr10:49590200-49598800 Weak transcription A549 lung
6 chr10:49590200-49599600 Weak transcription Pancreas Pancrea
7 chr10:49590400-49598600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr10:49590400-49599000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr10:49591400-49599600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr10:49591800-49597200 Weak transcription NHDF-Ad bronchial
11 chr10:49591800-49599000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr10:49592000-49597600 Weak transcription HUVEC blood vessel
13 chr10:49592200-49597400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr10:49592400-49597600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr10:49592600-49597400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr10:49592600-49597600 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr10:49592800-49597400 Weak transcription HMEC breast
18 chr10:49593000-49596800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr10:49593000-49597400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr10:49593000-49598000 Weak transcription Right Atrium heart
21 chr10:49593000-49599000 Weak transcription Primary hematopoietic stem cells blood
22 chr10:49593200-49597200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr10:49593200-49597200 Weak transcription Fetal Heart heart
24 chr10:49593200-49597600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr10:49593200-49599000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr10:49593200-49607600 Weak transcription Fetal Lung lung
27 chr10:49593400-49597400 Weak transcription Colon Smooth Muscle Colon
28 chr10:49593400-49597400 Weak transcription HSMMtube muscle
29 chr10:49593400-49599000 Weak transcription HSMM muscle
30 chr10:49593600-49597200 Weak transcription GM12878-XiMat blood
31 chr10:49593600-49597400 Weak transcription Fetal Kidney kidney
32 chr10:49593600-49598800 Weak transcription Muscle Satellite Cultured Cells --
33 chr10:49595000-49596800 Weak transcription Ovary ovary
34 chr10:49595000-49599400 Weak transcription Brain Cingulate Gyrus brain
35 chr10:49595000-49616000 Weak transcription Primary B cells from cord blood blood
36 chr10:49595400-49596400 Weak transcription Fetal Intestine Large intestine
37 chr10:49595400-49596800 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr10:49595600-49596000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr10:49595600-49597200 Enhancers K562 blood
40 chr10:49595800-49596000 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr10:49595800-49596000 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr10:49595800-49597200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015