Variant report
| Variant | rs144896074 |
|---|---|
| Chromosome Location | chr11:17542938-17542939 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:17516800-17553000 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr11:17527600-17549200 | Strong transcription | Duodenum Mucosa | Duodenum |
| 3 | chr11:17528800-17544000 | Weak transcription | Gastric | stomach |
| 4 | chr11:17529800-17548600 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 5 | chr11:17531600-17547200 | Strong transcription | Fetal Intestine Large | intestine |
| 6 | chr11:17531800-17552400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 7 | chr11:17532200-17547200 | Strong transcription | Fetal Intestine Small | intestine |
| 8 | chr11:17537400-17544800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr11:17537400-17546800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr11:17538400-17562200 | Weak transcription | Small Intestine | intestine |
| 11 | chr11:17539600-17550000 | Weak transcription | Spleen | Spleen |
| 12 | chr11:17540800-17552400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 13 | chr11:17541000-17552600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr11:17541400-17548000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 15 | chr11:17541400-17552400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 16 | chr11:17541600-17549600 | Weak transcription | Brain Anterior Caudate | brain |
| 17 | chr11:17541600-17550000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr11:17541600-17551600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 19 | chr11:17541600-17555800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 20 | chr11:17542000-17544000 | Weak transcription | Colonic Mucosa | Colon |
| 21 | chr11:17542000-17544200 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 22 | chr11:17542000-17547800 | Weak transcription | Brain Hippocampus Middle | brain |
| 23 | chr11:17542000-17548000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr11:17542400-17543200 | Enhancers | NHEK | skin |
| 25 | chr11:17542400-17544000 | Weak transcription | Fetal Stomach | stomach |
| 26 | chr11:17542400-17547800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 27 | chr11:17542600-17543400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr11:17542600-17549400 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr11:17542600-17550000 | Weak transcription | Brain Substantia Nigra | brain |
