Variant report

Variant	rs144984078
Chromosome Location	chr8:96394472-96394473
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429930	chr8:96317910-96454743	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1026549	chr8:96367183-96573134	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv539681	chr8:96367183-96573134	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1031846	chr8:96380353-96501647	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv539682	chr8:96380353-96501647	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1030659	chr8:96380353-97142611	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
7	esv2761450	chr8:96392380-96461950	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:96393000-96394800	Enhancers	Fetal Brain Male	brain
2	chr8:96393000-96394800	Enhancers	Fetal Brain Female	brain
3	chr8:96393000-96395000	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr8:96393200-96394800	Enhancers	H1 Cell Line	embryonic stem cell
5	chr8:96393200-96395000	Enhancers	Fetal Stomach	stomach
6	chr8:96393600-96394600	Enhancers	Brain Anterior Caudate	brain
7	chr8:96393600-96394800	Enhancers	Fetal Muscle Leg	muscle
8	chr8:96393800-96395400	Enhancers	Brain Germinal Matrix	brain
9	chr8:96394000-96394600	Enhancers	Stomach Smooth Muscle	stomach
10	chr8:96394000-96394800	Enhancers	Brain Cingulate Gyrus	brain
11	chr8:96394000-96396200	Enhancers	Fetal Heart	heart
12	chr8:96394200-96394600	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr8:96394200-96394600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
14	chr8:96394200-96394600	Enhancers	Ovary	ovary
15	chr8:96394400-96395000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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