Variant report

Variant	rs1450769
Chromosome Location	chr10:61218308-61218309
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11006525	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11006526	0.97[ASN][1000 genomes]
rs13376956	0.90[ASN][1000 genomes]
rs1450770	0.81[ASN][1000 genomes]
rs72810446	0.82[ASN][1000 genomes]
rs72810452	0.81[ASN][1000 genomes]
rs7918939	0.91[ASN][1000 genomes]
rs7919742	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508587	chr10:61150897-61278845	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61215000-61221200	Weak transcription	Ovary	ovary
2	chr10:61216800-61220800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:61216800-61222000	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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