Variant report

Variant	rs145270372
Chromosome Location	chr12:105878693-105878694
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899501	chr12:105819046-105950801	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832507	chr12:105821685-106005186	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1045689	chr12:105836970-105879110	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv899502	chr12:105862964-105904525	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	esv3325324	chr12:105878622-105883020	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:105863200-105884200	Weak transcription	Right Atrium	heart
2	chr12:105869000-105878800	Weak transcription	Placenta	Placenta
3	chr12:105869200-105878800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr12:105874400-105878800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr12:105874400-105878800	Weak transcription	NH-A	brain
6	chr12:105874400-105879000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr12:105874400-105879000	Weak transcription	A549	lung
8	chr12:105874400-105893600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr12:105874600-105879200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr12:105874800-105878800	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr12:105875000-105879200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr12:105875400-105879000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr12:105875400-105904400	Weak transcription	Aorta	Aorta
14	chr12:105876200-105879000	Weak transcription	HSMM	muscle
15	chr12:105876400-105879600	Weak transcription	Fetal Muscle Leg	muscle
16	chr12:105876400-105880400	Weak transcription	Fetal Kidney	kidney
17	chr12:105876400-105881800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr12:105877200-105878800	Weak transcription	HSMMtube	muscle
19	chr12:105878000-105878800	Weak transcription	Adipose Nuclei	Adipose
20	chr12:105878000-105879000	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr12:105878000-105879000	Weak transcription	Lung	lung
22	chr12:105878200-105879200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr12:105878200-105880800	Enhancers	Left Ventricle	heart
24	chr12:105878400-105881600	Enhancers	HUVEC	blood vessel
25	chr12:105878600-105880200	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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