Variant report

Variant rs145405416
Chromosome Location chr1:154128329-154128330
allele -/TTCT
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154112200-154138400 Weak transcription Psoas Muscle Psoas
2 chr1:154124400-154129800 Weak transcription Left Ventricle heart
3 chr1:154125000-154130400 Weak transcription Brain Hippocampus Middle brain
4 chr1:154125200-154131000 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr1:154125600-154129800 Weak transcription Brain Angular Gyrus brain
6 chr1:154125600-154129800 Weak transcription Gastric stomach
7 chr1:154125600-154130000 Weak transcription Brain Germinal Matrix brain
8 chr1:154125800-154129600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:154126200-154128600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:154126200-154128800 Genic enhancers Primary hematopoietic stem cells blood
11 chr1:154126200-154128800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:154126200-154129400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:154126200-154129400 Genic enhancers Primary T killer memory cells from peripheral blood blood
14 chr1:154126200-154129600 Weak transcription HSMMtube muscle
15 chr1:154126200-154130400 Genic enhancers Primary T cells fromperipheralblood blood
16 chr1:154126400-154128600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:154126400-154128600 Strong transcription Thymus Thymus
18 chr1:154126400-154129600 Genic enhancers K562 blood
19 chr1:154126400-154129600 Genic enhancers NHLF lung
20 chr1:154126400-154129800 Strong transcription Primary B cells from peripheral blood blood
21 chr1:154126400-154129800 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr1:154126400-154130400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:154126400-154133000 Weak transcription Ovary ovary
24 chr1:154126400-154146000 Strong transcription HMEC breast
25 chr1:154126600-154129600 Weak transcription HepG2 liver
26 chr1:154126600-154130200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
27 chr1:154126800-154128600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:154126800-154129800 Strong transcription GM12878-XiMat blood
29 chr1:154126800-154130000 Genic enhancers Primary T helper cells PMA-I stimulated --
30 chr1:154126800-154130200 Weak transcription Fetal Brain Male brain
31 chr1:154126800-154131600 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr1:154127000-154128400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:154127000-154128400 Enhancers Colon Smooth Muscle Colon
34 chr1:154127000-154128400 Enhancers Fetal Lung lung
35 chr1:154127000-154128400 Enhancers Skeletal Muscle Male skeletal muscle
36 chr1:154127000-154129400 Genic enhancers Primary T helper cells fromperipheralblood blood
37 chr1:154127000-154129600 Strong transcription Dnd41 blood
38 chr1:154127000-154130200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:154127000-154130200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:154127000-154130200 Genic enhancers Primary neutrophils fromperipheralblood blood
41 chr1:154127000-154130200 Strong transcription Fetal Intestine Small intestine
42 chr1:154127000-154131800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr1:154127000-154143400 Strong transcription Muscle Satellite Cultured Cells --
44 chr1:154127000-154143600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:154127000-154148400 Strong transcription Fetal Intestine Large intestine
46 chr1:154127000-154149600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:154127200-154128400 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr1:154127200-154128400 Genic enhancers Rectal Mucosa Donor 29 rectum
49 chr1:154127200-154128600 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr1:154127200-154129800 Strong transcription Primary monocytes fromperipheralblood blood

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