Variant report

Variant	rs145554596
Chromosome Location	chr5:76061717-76061718
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019669	chr5:75836365-76477788	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
2	nsv1035135	chr5:75927027-76092058	Strong transcription Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv965590	chr5:76061083-76081416	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:76056200-76067000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:76059200-76062600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr5:76059400-76067400	Weak transcription	HepG2	liver
4	chr5:76059600-76062600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr5:76060400-76063000	Enhancers	Osteobl	bone
6	chr5:76060600-76061800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr5:76060600-76070200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr5:76060800-76063400	Enhancers	NHDF-Ad	bronchial
9	chr5:76061200-76062600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr5:76061400-76062000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr5:76061400-76062600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr5:76061400-76062800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr5:76061400-76063000	Enhancers	NHLF	lung
14	chr5:76061600-76074800	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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