Variant report

Variant	rs145579928
Chromosome Location	chr6:113703769-113703770
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv830778	chr6:113662011-113729804	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1034256	chr6:113703567-113793790	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1021815	chr6:113703567-113799956	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113698800-113705800	Weak transcription	NH-A	brain
2	chr6:113699000-113704600	Weak transcription	Osteobl	bone
3	chr6:113699200-113706400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr6:113702200-113703800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:113702200-113704000	Enhancers	NHLF	lung
6	chr6:113702200-113705000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr6:113702800-113703800	Enhancers	Fetal Lung	lung
8	chr6:113703000-113704000	Bivalent Enhancer	Primary B cells from cord blood	blood
9	chr6:113703200-113703800	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr6:113703400-113704000	Enhancers	Fetal Stomach	stomach
11	chr6:113703400-113704400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:113703400-113706200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr6:113703600-113705000	Weak transcription	NHDF-Ad	bronchial
14	chr6:113703600-113705800	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr6:113703600-113706000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr6:113703600-113706200	Weak transcription	HUVEC	blood vessel
17	chr6:113703600-113706400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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