| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1024455 |
chr5:118770429-119487982 |
Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1016271 |
chr5:118836891-119487982 |
Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1023146 |
chr5:119301891-119623417 |
Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv537883 |
chr5:119301891-119623417 |
Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3331559 |
chr5:119306944-119536554 |
Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv532200 |
chr5:119317901-120102513 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv882780 |
chr5:119332670-119488924 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv882781 |
chr5:119369334-119557828 |
Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv599600 |
chr5:119399177-119507243 |
Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv1026457 |
chr5:119406305-119493661 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv537885 |
chr5:119406305-119493661 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv432803 |
chr5:119419101-119659101 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
esv2762547 |
chr5:119427979-119487383 |
ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
nsv1016024 |
chr5:119460796-119509057 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
n/a
|
Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page:
1
