Variant report

Variant	rs1457035
Chromosome Location	chr8:59249901-59249902
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs1037681	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10957048	0.83[EUR][1000 genomes]
rs10957049	0.84[ASN][1000 genomes]
rs13248215	0.84[AMR][1000 genomes]
rs13251750	0.94[ASN][1000 genomes]
rs13261699	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13269231	0.82[AMR][1000 genomes]
rs13270284	0.82[AMR][1000 genomes]
rs13275601	0.82[AMR][1000 genomes]
rs1457038	0.94[ASN][1000 genomes]
rs1457039	0.94[ASN][1000 genomes]
rs1457040	0.94[ASN][1000 genomes]
rs1457048	0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs1463437	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1598715	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1598716	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16923355	0.81[AMR][1000 genomes]
rs16923377	0.94[ASN][1000 genomes]
rs16923384	0.83[EUR][1000 genomes]
rs2326011	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34005877	0.94[ASN][1000 genomes]
rs34038478	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34333385	0.82[AMR][1000 genomes]
rs4294168	0.83[EUR][1000 genomes]
rs4496957	0.80[AMR][1000 genomes]
rs4737498	0.83[EUR][1000 genomes]
rs4738666	0.80[AMR][1000 genomes]
rs4738667	0.82[AMR][1000 genomes]
rs4738670	0.82[AMR][1000 genomes]
rs4738673	0.94[ASN][1000 genomes]
rs4738675	0.83[EUR][1000 genomes]
rs4738677	0.93[ASN][1000 genomes]
rs60787515	0.83[EUR][1000 genomes]
rs62514298	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6989503	0.81[AMR][1000 genomes]
rs6993550	0.95[CEU][hapmap];0.92[TSI][hapmap];0.83[EUR][1000 genomes]
rs6997474	0.83[EUR][1000 genomes]
rs6997952	0.83[EUR][1000 genomes]
rs7006132	0.81[AMR][1000 genomes]
rs7011612	0.81[AMR][1000 genomes]
rs721518	0.84[AMR][1000 genomes]
rs7818992	0.84[AMR][1000 genomes]
rs7819923	0.83[EUR][1000 genomes]
rs7827651	0.80[AMR][1000 genomes]
rs7829302	0.83[EUR][1000 genomes]
rs7830983	0.81[AMR][1000 genomes]
rs7831095	0.81[AMR][1000 genomes]
rs7834713	0.82[AMR][1000 genomes]
rs7836981	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7844896	0.95[CEU][hapmap];0.83[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59248200-59250200	Enhancers	Adipose Nuclei	Adipose
2	chr8:59248400-59251000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:59249200-59250000	Enhancers	Fetal Brain Male	brain
4	chr8:59249200-59250000	Flanking Active TSS	Fetal Heart	heart
5	chr8:59249200-59250600	Enhancers	Liver	Liver
6	chr8:59249800-59255200	Weak transcription	Right Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links