Variant report

Variant	rs145856137
Chromosome Location	chr11:8101946-8101947
allele	-/CCTAGTCA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr11:8101827-8108407	SK-N-SH	brain:	n/a	chr11:8104003-8104018 chr11:8103574-8103583
2	KAP1	chr11:8101930-8102486	HEK293	kidney:	n/a	n/a
3	REST	chr11:8101910-8103001	H1-neurons	neurons:	n/a	chr11:8102894-8102904 chr11:8102887-8102900
4	RCOR1	chr11:8101856-8102735	IMR90	lung:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:8101907-8101957	GM06990	blood:	n/a
2	chr11:8101907-8101957	HRPEpiC	eye:	n/a
3	chr11:8101907-8101957	HCT-116	colon:	n/a
4	chr11:8101907-8101957	MCF-7	breast:	n/a
5	chr11:8101907-8101957	CMK	blood:	n/a
6	chr11:8101907-8101957	HEEpiC	esophagus:	n/a
7	chr11:8101907-8101957	GM12878	blood:	n/a
8	chr11:8101907-8101957	HIPEpiC	eye:	n/a
9	chr11:8101907-8101957	GM12892	blood:	n/a
10	chr11:8101907-8101957	HMEC	breast:	n/a
11	chr11:8101907-8101957	Hela-S3	cervix:	n/a
12	chr11:8101907-8101957	AG09309	skin:	n/a
13	chr11:8101907-8101957	HPAEpiC	pulmonary alveolar:	n/a
14	chr11:8101907-8101957	Jurkat	blood:	n/a
15	chr11:8101907-8101957	SK-N-SH	brain:	n/a
16	chr11:8101907-8101957	ovcar-3	ovarian:	n/a
17	chr11:8101907-8101957	ProgFib	skin:	n/a
18	chr11:8101907-8101957	AG04449	skin:	fetal
19	chr11:8101907-8101957	RPTEC	kidney:	n/a
20	chr11:8101907-8101957	GM12891	blood:	n/a
21	chr11:8101907-8101957	BJ	skin:	n/a
22	chr11:8101907-8101957	A549	lung:	n/a
23	chr11:8101907-8101957	HCM	heart:	n/a
24	chr11:8101907-8101957	HUVEC	blood vessel:	n/a
25	chr11:8101907-8101957	K562	blood:	n/a
26	chr11:8101907-8101957	NB4	blood:	n/a
27	chr11:8101907-8101957	PFSK-1	brain:	n/a
28	chr11:8101907-8101957	HCPEpiC	choroid plexus:	n/a
29	chr11:8101907-8101957	BE2_C	brain:	n/a
30	chr11:8101907-8101957	AG04450	lung:	fetal
31	chr11:8101907-8101957	Caco-2	colon:	n/a
32	chr11:8101907-8101957	HRE	kidney:	n/a
33	chr11:8101907-8101957	NHBE	bronchial:	n/a
34	chr11:8101907-8101957	SK-N-SH_RA	brain:	n/a
35	chr11:8101907-8101957	Hepatocyte	liver:	n/a
36	chr11:8101907-8101957	NH-A	brain:	n/a
37	chr11:8101907-8101957	H1-hESC	embryonic stem cell:	embryo
38	chr11:8101907-8101957	SAEC	small airway:	n/a
39	chr11:8101907-8101957	ECC-1	luminal epithelium:	n/a
40	chr11:8101907-8101957	HCF	heart:	n/a
41	chr11:8101907-8101957	HepG2	liver:	n/a
42	chr11:8101907-8101957	HEK293	kidney:	embryo
43	chr11:8101907-8101957	U87	brain:	n/a
44	chr11:8101907-8101957	HNPCEpiC	eye:	n/a
45	chr11:8101907-8101957	LNCaP	prostate:	n/a
46	chr11:8101907-8101957	HL-60	blood:	n/a
47	chr11:8101907-8101957	T-47D	breast:	n/a
48	chr11:8101907-8101957	IMR90	lung:	fetal
49	chr11:8101907-8101957	AG10803	skin:	n/a
50	chr11:8101907-8101957	GM19239	blood:	n/a

No data

Variant related genes	Relation type
TUB	TF binding region
TUB	CpG island

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052808	chr11:8011647-8129191	Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
2	esv1829170	chr11:8068594-8216369	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv428249	chr11:8068594-8216369	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	esv3421936	chr11:8101601-8104149	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8100400-8102200	Weak transcription	Pancreas	Pancrea
2	chr11:8100600-8102000	Enhancers	Fetal Brain Male	brain
3	chr11:8101400-8102000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr11:8101600-8102000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:8101600-8102200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
6	chr11:8101600-8102200	Bivalent Enhancer	HepG2	liver
7	chr11:8101800-8102000	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
8	chr11:8101800-8102000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
9	chr11:8101800-8102000	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr11:8101800-8102000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
11	chr11:8101800-8102000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
12	chr11:8101800-8102000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr11:8101800-8102000	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr11:8101800-8102000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr11:8101800-8102000	Flanking Active TSS	Brain Angular Gyrus	brain
16	chr11:8101800-8102000	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
17	chr11:8101800-8102000	Flanking Active TSS	Fetal Brain Female	brain
18	chr11:8101800-8102000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
19	chr11:8101800-8102000	Active TSS	Stomach Smooth Muscle	stomach
20	chr11:8101800-8102200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr11:8101800-8102200	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
22	chr11:8101800-8102200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
23	chr11:8101800-8102200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr11:8101800-8102200	Flanking Active TSS	Brain Cingulate Gyrus	brain
25	chr11:8101800-8102200	Enhancers	Brain Inferior Temporal Lobe	brain
26	chr11:8101800-8102200	Bivalent Enhancer	Fetal Muscle Leg	muscle
27	chr11:8101800-8102200	Enhancers	Ovary	ovary
28	chr11:8101800-8103400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell

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