Variant report

Variant	rs145956327
Chromosome Location	chr15:76602911-76602912
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:76582923..76594852-chr15:76601949..76606997,18	MCF-7	breast:
2	chr15:76517181..76519721-chr15:76602211..76604425,2	K562	blood:
3	chr15:76579019..76580557-chr15:76600815..76603366,2	K562	blood:
4	chr15:76602419..76607116-chr15:76626572..76631104,6	MCF-7	breast:
5	chr15:76601574..76614388-chr15:76623703..76634730,38	K562	blood:
6	chr15:76600511..76607655-chr15:76613791..76629933,32	MCF-7	breast:
7	chr15:76584135..76596152-chr15:76600630..76606670,15	MCF-7	breast:
8	chr15:76601310..76610583-chr15:76618699..76634643,40	K562	blood:

No data

Variant related genes	Relation type
ENSG00000159556	Chromatin interaction
ENSG00000259514	Chromatin interaction
ENSG00000140374	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520069	chr15:76602212-76609181	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:76558000-76603000	Weak transcription	Aorta	Aorta
2	chr15:76601600-76603000	Weak transcription	Gastric	stomach
3	chr15:76601800-76603000	Flanking Active TSS	Hela-S3	cervix
4	chr15:76602000-76603000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
5	chr15:76602000-76603000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr15:76602000-76603000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
7	chr15:76602000-76603000	Flanking Active TSS	Liver	Liver
8	chr15:76602000-76603000	Flanking Active TSS	Dnd41	blood
9	chr15:76602000-76603000	Flanking Active TSS	HMEC	breast
10	chr15:76602000-76603000	Flanking Active TSS	NHEK	skin
11	chr15:76602000-76603200	Flanking Active TSS	Adipose Nuclei	Adipose
12	chr15:76602000-76604000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr15:76602000-76604000	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr15:76602000-76604200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr15:76602000-76604200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr15:76602200-76603000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr15:76602200-76603000	Enhancers	Placenta Amnion	Placenta Amnion
18	chr15:76602200-76603000	Flanking Active TSS	K562	blood
19	chr15:76602200-76604000	Active TSS	HSMMtube	muscle
20	chr15:76602200-76604200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr15:76602200-76604200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
22	chr15:76602200-76604400	Active TSS	Stomach Smooth Muscle	stomach
23	chr15:76602400-76603000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr15:76602400-76603000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr15:76602400-76603000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
26	chr15:76602400-76603000	Flanking Active TSS	Osteobl	bone
27	chr15:76602400-76603200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr15:76602400-76603200	Flanking Active TSS	HUVEC	blood vessel
29	chr15:76602400-76603400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr15:76602400-76604000	Active TSS	H1 Cell Line	embryonic stem cell
31	chr15:76602400-76604000	Active TSS	HUES48 Cell Line	embryonic stem cell
32	chr15:76602400-76604000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr15:76602400-76604000	Active TSS	A549	lung
34	chr15:76602400-76604200	Active TSS	Breast Myoepithelial Primary Cells	Breast
35	chr15:76602400-76604200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr15:76602400-76604400	Active TSS	ES-I3 Cell Line	embryonic stem cell
37	chr15:76602400-76604400	Active TSS	Rectal Mucosa Donor 29	rectum
38	chr15:76602400-76604400	Active TSS	NHLF	lung
39	chr15:76602600-76603000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr15:76602600-76603000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
41	chr15:76602600-76603000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr15:76602600-76603000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
43	chr15:76602600-76603000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
44	chr15:76602600-76603000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
45	chr15:76602600-76603000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
46	chr15:76602600-76603000	Flanking Active TSS	Fetal Lung	lung
47	chr15:76602600-76603200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
48	chr15:76602600-76603200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
49	chr15:76602600-76603200	Weak transcription	Spleen	Spleen
50	chr15:76602600-76603200	Flanking Active TSS	NH-A	brain

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