Variant report

Variant	rs145968976
Chromosome Location	chr7:25655736-25655737
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016813	chr7:25405859-26150509	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
2	nsv538803	chr7:25405859-26150509	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
3	nsv1020230	chr7:25649344-25783071	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
4	esv2753233	chr7:25655060-25771160	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25653000-25655800	Enhancers	Fetal Thymus	thymus
2	chr7:25653000-25657200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
3	chr7:25653200-25657600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr7:25653200-25657600	Enhancers	Primary T cells from cord blood	blood
5	chr7:25653400-25656200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr7:25653400-25659600	Enhancers	Primary B cells from peripheral blood	blood
7	chr7:25653600-25655800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr7:25653600-25655800	Enhancers	Left Ventricle	heart
9	chr7:25653600-25655800	Enhancers	Spleen	Spleen
10	chr7:25653600-25657400	Enhancers	Primary hematopoietic stem cells	blood
11	chr7:25653600-25657600	Enhancers	Adipose Nuclei	Adipose
12	chr7:25653800-25656200	Enhancers	Fetal Heart	heart
13	chr7:25654000-25655800	Enhancers	Brain Hippocampus Middle	brain
14	chr7:25654000-25656000	Enhancers	Fetal Muscle Leg	muscle
15	chr7:25654200-25655800	Enhancers	Brain Anterior Caudate	brain
16	chr7:25654400-25656400	Enhancers	Primary B cells from cord blood	blood
17	chr7:25654400-25657200	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr7:25654600-25656000	Enhancers	Thymus	Thymus
19	chr7:25654800-25656600	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr7:25655000-25655800	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr7:25655200-25656400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
22	chr7:25655200-25656600	Enhancers	Monocytes-CD14+_RO01746	blood
23	chr7:25655200-25656800	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr7:25655200-25657200	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr7:25655200-25657400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr7:25655200-25659600	Weak transcription	Fetal Stomach	stomach
27	chr7:25655200-25660000	Weak transcription	Placenta	Placenta
28	chr7:25655200-25664800	Weak transcription	Fetal Kidney	kidney
29	chr7:25655400-25655800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
30	chr7:25655400-25655800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr7:25655400-25656200	Enhancers	Primary T helper cells fromperipheralblood	blood
32	chr7:25655400-25657000	Weak transcription	Fetal Lung	lung
33	chr7:25655600-25656400	Enhancers	Colon Smooth Muscle	Colon
34	chr7:25655600-25656400	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr7:25655600-25656800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr7:25655600-25657200	Weak transcription	Lung	lung
37	chr7:25655600-25657400	Enhancers	Primary T helper naive cells from peripheral blood	blood
38	chr7:25655600-25657800	Enhancers	Primary hematopoietic stem cells short term culture	blood
39	chr7:25655600-25659600	Weak transcription	Primary T cells fromperipheralblood	blood
40	chr7:25655600-25660000	Weak transcription	Aorta	Aorta
41	chr7:25655600-25664200	Weak transcription	Right Atrium	heart

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