The 2.0 version of rSNPBase

Variant report

Variant rs146042014
Chromosome Location chr10:18629941-18629942
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18629200-18630200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr10:18629200-18630200 Active TSS Colon Smooth Muscle Colon
3 chr10:18629200-18630400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
4 chr10:18629200-18630400 Active TSS Aorta Aorta
5 chr10:18629400-18630000 Active TSS Breast Myoepithelial Primary Cells Breast
6 chr10:18629400-18630000 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
7 chr10:18629400-18630000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
8 chr10:18629400-18630000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr10:18629400-18630000 Active TSS Colonic Mucosa Colon
10 chr10:18629400-18630000 Flanking Active TSS Fetal Brain Female brain
11 chr10:18629400-18630000 Flanking Active TSS Fetal Lung lung
12 chr10:18629400-18630000 Active TSS Fetal Muscle Trunk muscle
13 chr10:18629400-18630000 Flanking Active TSS Ovary ovary
14 chr10:18629400-18630000 Active TSS Pancreas Pancrea
15 chr10:18629400-18630000 Active TSS Psoas Muscle Psoas
16 chr10:18629400-18630000 Active TSS Rectal Mucosa Donor 31 rectum
17 chr10:18629400-18630000 Active TSS Skeletal Muscle Male skeletal muscle
18 chr10:18629400-18630200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
19 chr10:18629400-18630200 Active TSS Brain Angular Gyrus brain
20 chr10:18629400-18630200 Active TSS Duodenum Mucosa Duodenum
21 chr10:18629400-18630200 Active TSS Duodenum Smooth Muscle Duodenum
22 chr10:18629400-18630200 Active TSS Fetal Kidney kidney
23 chr10:18629400-18630200 Active TSS Fetal Stomach stomach
24 chr10:18629400-18630200 Active TSS Rectal Smooth Muscle rectum
25 chr10:18629400-18630200 Flanking Active TSS NH-A brain
26 chr10:18629400-18630200 Active TSS NHDF-Ad bronchial
27 chr10:18629400-18630400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr10:18629400-18630400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
29 chr10:18629400-18630400 Active TSS Brain Inferior Temporal Lobe brain
30 chr10:18629400-18630400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr10:18629400-18630400 Active TSS Rectal Mucosa Donor 29 rectum
32 chr10:18629400-18630400 Active TSS Stomach Smooth Muscle stomach
33 chr10:18629400-18631600 Active TSS Left Ventricle heart
34 chr10:18629400-18632600 Active TSS Right Atrium heart
35 chr10:18629400-18632800 Active TSS Right Ventricle heart
36 chr10:18629600-18630000 Enhancers HUES6 Cell Line embryonic stem cell
37 chr10:18629600-18630000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
38 chr10:18629600-18630000 Flanking Active TSS Adipose Nuclei Adipose
39 chr10:18629600-18630000 Active TSS Liver Liver
40 chr10:18629600-18630000 Active TSS Brain Substantia Nigra brain
41 chr10:18629600-18630000 Active TSS Fetal Intestine Large intestine
42 chr10:18629600-18630000 Enhancers Placenta Placenta
43 chr10:18629600-18630000 Active TSS NHEK skin
44 chr10:18629600-18630200 Active TSS Brain Anterior Caudate brain
45 chr10:18629600-18630200 Active TSS Fetal Muscle Leg muscle
46 chr10:18629600-18630200 Active TSS Fetal Thymus thymus
47 chr10:18629600-18630400 Flanking Active TSS Brain Cingulate Gyrus brain
48 chr10:18629600-18630600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr10:18629600-18633000 Active TSS Fetal Heart heart
50 chr10:18629800-18630000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015