| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv557741 |
chr12:21578559-22169854 |
Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1051073 |
chr12:21910875-22271209 |
Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv470275 |
chr12:21938544-22126314 |
Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv639 |
chr12:22110979-22153478 |
Enhancers Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
esv3342564 |
chr12:22123778-22128844 |
Enhancers Flanking Active TSS Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
esv3419963 |
chr12:22123788-22128847 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
