Variant report

Variant rs146339780
Chromosome Location chr21:48021941-48021942
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48018000-48022200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr21:48018000-48024600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr21:48018000-48025000 Weak transcription Spleen Spleen
4 chr21:48018600-48022200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr21:48018600-48022600 Genic enhancers Cortex derived primary cultured neurospheres brain
6 chr21:48018600-48022800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr21:48018600-48023200 Enhancers K562 blood
8 chr21:48018800-48024600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr21:48019200-48022200 Weak transcription Fetal Muscle Trunk muscle
10 chr21:48019200-48024400 Weak transcription Right Atrium heart
11 chr21:48019400-48022200 Weak transcription Placenta Placenta
12 chr21:48019400-48022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr21:48019400-48022600 Weak transcription Fetal Stomach stomach
14 chr21:48019400-48023800 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr21:48019400-48024400 Weak transcription Fetal Thymus thymus
16 chr21:48019400-48024800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr21:48019400-48024800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr21:48019600-48022400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr21:48019600-48024600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr21:48019800-48022600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr21:48019800-48022600 Weak transcription HSMMtube muscle
22 chr21:48019800-48024600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr21:48019800-48024800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr21:48019800-48025000 Weak transcription Fetal Brain Male brain
25 chr21:48019800-48025800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr21:48020000-48023800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr21:48020000-48024400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr21:48020000-48024800 Weak transcription Osteobl bone
29 chr21:48020200-48023400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr21:48020400-48024000 Weak transcription Primary T cells from cord blood blood
31 chr21:48020600-48024400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr21:48020800-48022000 Genic enhancers Breast Myoepithelial Primary Cells Breast
33 chr21:48020800-48022200 Enhancers Gastric stomach
34 chr21:48020800-48022600 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
35 chr21:48020800-48022800 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
36 chr21:48020800-48022800 Enhancers Stomach Mucosa stomach
37 chr21:48021000-48022600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr21:48021000-48022600 Transcr. at gene 5' and 3' Brain Inferior Temporal Lobe brain
39 chr21:48021000-48022800 Enhancers Ovary ovary
40 chr21:48021200-48022200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr21:48021200-48022200 Weak transcription Fetal Muscle Leg muscle
42 chr21:48021200-48022800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
43 chr21:48021200-48024400 Weak transcription Adipose Nuclei Adipose
44 chr21:48021200-48024600 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr21:48021400-48022000 Enhancers Brain Angular Gyrus brain
46 chr21:48021400-48022400 Enhancers Pancreas Pancrea
47 chr21:48021400-48022600 Flanking Active TSS Brain Substantia Nigra brain
48 chr21:48021400-48022800 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr21:48021400-48022800 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
50 chr21:48021400-48024600 Weak transcription Primary T helper cells PMA-I stimulated --

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